BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008G03LP1|AL425915
(796 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1743 1562 0.0
>3x_Contig1743
Length = 20172
Score = 1562 bits (788), Expect = 0.0
Identities = 795/796 (99%), Gaps = 1/796 (0%)
Strand = Plus / Plus
Query: 1 gatcggtgcgtctacgatggctaagaagaaggataaagagtccaaaaaggctcgtactga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10691 gatcggtgcgtctacgatggctaagaagaaggataaagagtccaaaaaggctcgtactga 10750
Query: 61 agccaagaataagaaggcactgggaaaaagccgcagtgaaagataaaaagaaggcaaaga 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10751 agccaagaataagaaggcactgg-aaaaagccgcagtgaaagataaaaagaaggcaaaga 10809
Query: 121 agttatctcaagatgaagaagaagatgacatggacattgaagaaatgttagctaacttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10810 agttatctcaagatgaagaagaagatgacatggacattgaagaaatgttagctaacttca 10869
Query: 181 agcgggaacaggagaactttgagaagattaatgtcgaaaatgtggataggcccgaccaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10870 agcgggaacaggagaactttgagaagattaatgtcgaaaatgtggataggcccgaccaac 10929
Query: 241 gtattaatccgtgtatgtttgtgaacccagcccatggtaagcgtgaattaatgatgtttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10930 gtattaatccgtgtatgtttgtgaacccagcccatggtaagcgtgaattaatgatgtttg 10989
Query: 301 gcggggaatctaccacccaagaaacaggtaccacacatttctacaacgatttatttgtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10990 gcggggaatctaccacccaagaaacaggtaccacacatttctacaacgatttatttgtat 11049
Query: 361 actcattagatacagatacttggaaaaggtatacatctcagaattctccaatgccaagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11050 actcattagatacagatacttggaaaaggtatacatctcagaattctccaatgccaagat 11109
Query: 421 catcagcggcagtagcatctcatccaacaggtgtagctttaatccatggtggtgagttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11110 catcagcggcagtagcatctcatccaacaggtgtagctttaatccatggtggtgagttct 11169
Query: 481 cttccccaaagcagaatactttctatcattattctgattcatggctattcgactgctcta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11170 cttccccaaagcagaatactttctatcattattctgattcatggctattcgactgctcta 11229
Query: 541 gcaaagaatggacaaaggttgaacaaaagaatgggcctagtgctaggtcaggtcatagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11230 gcaaagaatggacaaaggttgaacaaaagaatgggcctagtgctaggtcaggtcatagaa 11289
Query: 601 tggcaatttggaaaaattttatcatacttcatggtgggttcagggatttaggtacctcta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11290 tggcaatttggaaaaattttatcatacttcatggtgggttcagggatttaggtacctcta 11349
Query: 661 ccacgtatctgaatgacttatgggtattcgatataactaattataaatggaaacaagtcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11350 ccacgtatctgaatgacttatgggtattcgatataactaattataaatggaaacaagtcg 11409
Query: 721 agcttcccgctaatcatcctattccagatgcaagatctggccattcactgatatctacag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11410 agcttcccgctaatcatcctattccagatgcaagatctggccattcactgatatctacag 11469
Query: 781 cggagggcgccgtttt 796
||||||||||||||||
Sbjct: 11470 cggagggcgccgtttt 11485
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6812
Number of Sequences: 1807
Number of extensions: 6812
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 796
length of database: 10,358,551
effective HSP length: 16
effective length of query: 780
effective length of database: 10,329,639
effective search space: 8057118420
effective search space used: 8057118420
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)